Additional file 1: of DNA methylation signatures of breast cancer in peripheral T-cells

Table S1. Clinical table of normal individuals and cancer patients. Table S2. Primer sequences. Table S3. List of CpG probes, whose DNA methylation changes correlate with progression in t-cells of breast cancer patients. Table S4. List of top 89 CpG probes (r > 0.7, r < − 0.7, p < 0.01), whose DNA methylation changes correlate with progression in t-cells of breast cancer patients. Table S5. Differentially methylated probes in t-cells of breast cancer patients. Table S6. Differentially methylated probes in t-cells of breast cancer patients (stages 1 and 2). Table S7. Differentially methylated probes in t-cells of breast cancer patients (stages 3 and 4). Table S8. List of overlapped differentially methylated probes between stages 1,2 and stages 3 and 4 in t-cells of breast cancer patients. Table S9. Ingenuity Canonical Pathways of differentially methylated genes in T cells of breast cancer. Table S10. Upstream regulators of differentially methylated genes in T cells of breast cancer. Table S11. Overlap CpG probes, whose DNA methylation changes correlate with progression in t-cells of breast cancer patients and differentially methylated probes in DCIS, mixed and invasive breast from dataset GSE60185. Table S12. Canonical Pathways of genes whose DNA methylation changes with breat cancer progression in T cells and overlapped with differentially methylated genes in DCIS, mixed and invasive breast cancer. Table S13. Upstream regulators of genes whose DNA methylation changes with breat cancer progression in T cells and overlapped with differentially methylated genes in DCIS, mixed and invasive breast cancer. (XLSX 6740 kb)