EBAII n1 scRNAseq : Common resources (gene lists, ...)

This repository contains R objects (RDS) for

Gene lists used for the single-cell RNAseq analysis pre-processing

Considered gene-lists :

mitochondrial genes

ribosomal protein-coding genes

mechanical stress response genes

Considered species :

homo sapiens (human)

mus musculus (mouse)

rattus norvegicus (rat

Reference bulk RNAseq profiles from ImmGenData, for automatic cell type annotation through celldex