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ISO-seq Minc transcripts containing the repeat and matching the genome

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Recherche Data Gouv France2023-01-01 更新2026-04-09 收录
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https://entrepot.recherche.data.gouv.fr/citation?persistentId=doi:10.57745/CHCR3F
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资源简介:
We used the publicly available data of IsoSeq sequencing of Meloidogyne incognita (available under NCBI accessions PRJNA787737, SRP350177. The data were obtained using a mix of M. incognita developmental stages of. We searched for presence of telomeric motifs in the ISO-seq reads. We mapped the motif-containing ISO-seq reads to the reference genome of M. incognita using GMAP with default parameters. A summary of the mapping results is provided here.
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2023-01-01
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