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exclusive-alpha-helices-all-alpha-proteins

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Figshare2018-06-21 更新2026-04-08 收录
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Dataset containing physical-chemical and strucutural descriptors for exclusive alpha helices (only a single helical structure segment is present in the protein's whole structure) and its flanking regions.<br>Only alpha helices from <b>all-alpha proteins </b>are eligible for this dataset.<br><br>Data is organized into sections. Each section begins with the following header: <b>length, pdb_name, chain_id, flag, position, [parameter]</b>.<br><br><b>length</b> is the number of amino acid residues comprising the aplha helix.<br><b>flag</b> indicates the amino acid residue underlying region, namely: flanking region before the alpha helix (<b>&lt;</b>); alpha helix (<b>=</b>); flanking region after the alpha helix (<b>&gt;</b>).<br><b>[parameter]: </b>paramater's value for the given amino acid residue. All parameters are extracted from the STING Database.<br><b>Example:</b><b>Solvent-accessible surface area </b><b>for all amino acid residues forming an alpha helix of length 6</b><b><br></b>length, pdb_name, chain_id, flag, position, Accessible_Surface_in_Isolation6,1not,A,=,1,136.585<br>6,1not,A,=,2,106.0686,1not,A,=,3,11.3226,1not,A,=,4,49.5176,1not,A,=,5,227.676,1not,A,"=",6,110.9<b><br></b>
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2018-06-21
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