Additional file 9: of De novo assembly and characterization of breast cancer transcriptomes identifies large numbers of novel fusion-gene transcripts of potential functional significance

Fusion read frequency for 79 breast cancer specific fusion-protein transcripts relative to total reads. Expression for fusion transcripts, as well as, those associated wild-type 5′- and 3′- reference transcripts is summarized in the file. Expression is the normalized RNA-Seq read counts as estimated using RSEM followed by upper quartile normalization. Fusion read frequency is shown in column H. The first sheet in the excel file contains the data columns and a key describing the data is on the second excel sheet. (XLSX 19 kb)