five

C10_8clocks_topolConvergence

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DataONE2016-05-31 更新2024-06-26 收录
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File_C10 (pdf). Convergence diagnostics for tree topologies sampled in C8. (A) AWTY [20] plots demonstrating relatively good correlation (albeit with substantial variance) for all clades across 4 runs, and (A) high variation at different stages in a single run, but no obvious directional trends. The topology convergence statistics from MrBayes and AWTY (standard deviation of split frequencies across runs) were also relatively good ie being <0.093 across all comparisons (see top right cells of panel A). These results are consistent with convergence or near-convergence, i.e. runs sampling similar distributions but cycling very slowly through parameter space.
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