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Population genetics parameters and tests.

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NIAID Data Ecosystem2026-03-08 收录
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-Abbreviations: n-sample size, %C-frequency of common invasive haplotype. -Descriptive statistics: π-nucleotide diversity, HD-haplotype diversity, τ-the date of population growth in mutational time under the expansion model, rg-raggedness, F*-Fu&Li’s F*, D*-Fu&Li’s D*, D-Tajima’s D, Fs-Fu’s Fs. -Statistical tests: ND-probability of non-differentiation (used to justify combining India, Israel, and select invasive populations as panmictic), ED-test of demographic expansion p-value, ES-test of spatial expansion p-value. -Descriptive statistics could not be calculated for populations with HD = 0. -Expansion tests were conducted for panmictic populations and populations where n>7. -Significance is assessed under a two-tailed test for all test statistics and ND and a one-tailed test for ED and ES. -Bold denotes significance favoring expansion while italics denote significance rejecting an expansion model. 1Farris et al. [12]; 2The invasive panmictic population includes all populations with a sample size >7 and a common invasive haplotype frequency >90%. Population genetics parameters and tests.
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2015-12-03
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