S2 Appendix -

Tables B-P. Summary of MSG application to 14 human traits. The source of GWAS and MSG identified trait-associated genes are provided. Tables Q-S. MSG identified genes that are within 500 kb distance to GWAS significant loci in AD, LDL-C, and schizophrenia. Tables T-V. MSG identified genes that overlap with S-PrediXcan identified genes in AD, LDL-C, and schizophrenia. Table W. Summary of applying sCCA+ACAT with and without retraining the prediction model using elastic net to AD, LDL-C, and schizophrenia. Table X. Summary of using sCCA-generated splicing-CVs and applying SVD+χ2, GBJ, and ACAT tests to AD, LDL-C, and schizophrenia. Table Y. Number of testable genes in the analysis of 14 human traits. Table Z. Number of significant genes within and outside of GWAS loci and number of GWAS loci covered by significant genes in the analysis of AD, LDL-C, and schizophrenia.
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