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High-quality genome assembly of a white eared pheasant individual

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Figshare2023-11-09 更新2026-04-08 收录
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https://figshare.com/articles/dataset/High-quality_genome_assembly_of_a_white_eared_pheasant_individual/24535015/1
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White eared pheasant (WT), (<i>Crossoptilon</i> <i>crossoptilon</i>), inhibiting at high altitudes (3000~4,300 m), is a Galliformes bird native to the Qinghai, Sichuan, Yunnan and Tibet Province of China. Due to the difficulty of sequencing the precious species, there is no high-quality genome assembly for the species, hampering the understanding of their genetic mechanisms. To fill the gap, we sequenced and assembled a WT individual using Illumina short reads, PacBio long reads and Hi-C reads. With a contig N50 of 19.63 Mb, scaffold N50 of 29.59 Mb, total length of 1.02 Gb and BUSCO completeness of 97.2%, the assembly is highly complete. Evaluation shows that the assembly is at chromosome-level with only six gaps. Thus, our assembly provides a valuable genetic resource for the <i>crossoptilon</i> species.
提供机构:
Wu, Siwen
创建时间:
2023-11-09
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