Donor-aware mitochondrial transcriptomic reanalysis across autism postmortem brain and neurodevelopmental models

Reproducibility package for a donor-aware analysis of mitochondrial transcriptional modules in autism postmortem brain and neurodevelopmental models. The deposit contains analysis and plotting code, frozen sample maps, accession-level dataset selection decisions, retrospective GEO search records, sensitivity and influence analyses, covariate analyses, updated-search analyses, independent single-cell clustering analyses, parameter and environment files, author-generated processed results, supplementary tables, and source data for the main and supplementary figures. Third-party source datasets are not redistributed. Accession numbers, exact source URLs, expected file sizes, SHA-256 checksums, and verified download instructions are provided. Files are maintained under restricted access. Confidential access may be provided to editors and reviewers through a time-limited Can view link.