Supplementary data for the manuscript titled "Integrative genomic reconstruction reveals heterogeneity in carbohydrate utilization across human gut bifidobacteria"

This repository contains the following files:bif_263_fna.zip - FASTA file with genomic sequences of 263 reference Bifidobacterium genomesbif_263_subsystem_proteins.zip - FASTA file with 39589 protein sequences of 589 curated functional roles predicted in 263 reference Bifidobacterium genomesselected_gbk_files.zip - GenBank files of six reference Bifidobacterium genomes. These files have the specific locus tags that were reported in several supplementary tables (RNA-seq data of Bifidobacterium catenulatum subsp. kashiwanohense Bg42221_1E1 and regulon reconstructions)