A robust workflow to benchmark deconvolution of multi-omic data - Datasets
收藏NIAID Data Ecosystem2026-05-02 收录
下载链接：
https://zenodo.org/record/14024478
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资源简介：
References profiles used for the generation of in silico mixes to benchmark deconvolution methods;
Proportion matrix for the PaMIX dataset.
(https://github.com/bcm-uga/DeconvBenchmark/)
Dataset name
Omic
Tissue
Number of cell types
Publication
BrCL1
DNAm/RNA
Breast cancer
4
10.1016/j.celrep.2016.10.057 / 10.1371/journal.pcbi.1007510
PaCL1
DNAm/RNA
PDAC
5
cf deconbench.github.io
PaCL2
DNAm/RNA
PDAC
9
10.1101/2024.11.08.622633
BlCL
RNA
Whole blood
6
10.1371/journal.pone.0118528
BrCL2
RNA
Breast cancer
6
10.1186/s13059-023-03016-6
LuCL
DNAm
Lung cancer
9
10.1038/s41598-017-04248-w / 10.1371/journal.pone.0208915
PaMIX
DNAm/RNA
PDAC
9
10.1101/2024.11.08.622633
创建时间：
2025-01-23
