首页/数据集/PlasX model, Predicted plasmids, and Known plasmids

PlasX model, Predicted plasmids, and Known plasmids

NIAID Data Ecosystem2026-03-13 收录

质粒预测

微生物基因组分析

数据链接：

https://zenodo.org/record/5732446 数据链接链接失效反馈

官方服务：

资源简介：

PlasX model and all analyses of known and predicted plasmids

应用场景：

创建时间：

2022-01-13

III型分泌效应蛋白

微生物基因组分析

This dataset contains the Phase I analysis output from Effectidor2, used for the refinement and classification of predicted Type III secreted effectors (T3SEs) across 57 Pseudomonas syringae ge

DataCite Commons2025-11-01 更新60

Plasmid database (Gradient Boosting model construction)

质粒预测

梯度提升建模

Plasmid database used for the training and testing of the Gradient Boosting model. Plasmids present in the samples used for this step were removed from the database.

NIAID Data Ecosystem20

Bradyrhizobium sp. 40

微生物基因组分析

根瘤菌分类

Bradyrhizobium sp. 40

rrnDB - The Ribosomal RNA Database10

Proportion of mHVR clusters shared between different genomes and different strains in the 95% reference dataset.

微生物基因组分析

种群遗传结构

Proportion of mHVR clusters shared between different genomes and different strains in the 95% reference dataset.

NIAID Data Ecosystem30

MetaTransformer trained species model