Meta-analysis of public RNA sequencing data of queens and workers in social Hymenoptera and termites
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Table_S1: Datasets for meta-analysis of public RNA-sequencing data in eusocial insects Table_S2: Number of transcripts translated into proteins in each species. Table_S3: Gene expression ratios when comparing queens and workers (QW-ratio) Table_S4: QW-score calculated based on the QW-ratio (212 genes were evaluated) Table_S5: QW-score by species Table_S6: QW-score calculated based on the QW-ratio (2595 genes were evaluated) Table_S7: The reference genome and transcriptome used for quantifying the gene expression level Figure_S1: Number of transcripts presented commonly across species. The blue bars indicate the number of transcripts that could be converted to Apis mellifera IDs for each species. The orange line indicates the number of transcripts that were commonly present when the expression ratio tables for each species were merged. Merging was done from left to right for the species listed. In the sequence similarity search, two protein sequence sets of Temnothorax longispinosus were used as listed in Table S6. One is the de novo assembled reference (Temnothorax longispinosus1) transcriptome, and the second was extracted from the genome information (Temnothorax longispinosus2). Figure_S2: Scatter plots of QW-score (2595 genes were evaluated). This gene set was created using expression data from a subset of Temnothorax, Reticulitermes, and Macrotermes. Red plots indicate genes with high or low QW-score from the 212 gene set. Supplemental_Discussion: Additional discussion of the genes identified in this study was described. peptide.tar.gz: The files of amino acid sequences newly created for the present study transcript.tar.gz: The files of transcript sequences newly created for the present study
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2022-11-14



