SNP data from Neurospora intermedia

This dataset contains a VCF file with SNPs from 21 <i>Neurospora intermedia</i> and 5 <i>N. metzenbergii</i> strains mapped to the genome assembly of <i>N. intermedia</i> strain 8807.<br>SNPs are generated from raw paired-end reads which have been deposited to the Sequence Read Archive
(SRA) in BioProjects PRJNA486257
(http://www.ncbi.nlm.nih.gov/bioproject/486257).<br>See Svedberg et al., (2018) "Convergent evolution of complex
genomic rearrangements in two fungal meiotic drive elements" for further
information: https://www.nature.com/articles/s41467-018-06562-x (DOI:10.1038/s41467-018-06562-x)Supplementary Table 11 contains Illumina sequencing statistics.<br><br>Full list of strains: 10411, 1785, 1786, 1787, 1795, 1832, 1938, 2316, 2365, 3194, 5119, 5124, 6249, 6263, 6595, 6795, 7402, 7426, 7427, 7429, 8761, 8767, 8769, 8793, 8853, P4149<br><br>All strains are referred to by their ID numbers at the Fungal Genetics Stock Center (www.fgsc.net), where they also can be ordered.<br>The reference genome of strain 8807 was released with the paper: <br>
Sun et al. (2017). Large-scale suppression of recombination predates genomic rearrangements in Neurospora tetrasperma. Nature Communications <i>8</i>, 1140. (https://www.nature.com/articles/s41467-017-01317-6)It can be downloaded here:<br>Sun,
Yu; Svedberg, Jesper; Hiltunen, Markus; Corcoran, Pádraic; Johannesson,
Hanna (2017): High-quality Neurospora tetrasperma genome assemblies.
figshare. Dataset.https://figshare.com/articles/High-quality_Neurospora_tetrasperma_genome_assemblies/5327515<br>