Table S2

Table S2. Raw peak intensity of 720 total lipid   molecules identified at 16h and 48h time points for SARS-CoV-2 infected and Niclosamide (NIC) treated conditions.    

It is common in lipidomics to have isomeric identification due to the inability   of chromatography to separate out all isomers detected.    A   ‘1’ in the name of the lipid means that MS/MS data was able to identify down   to the fatty acyl chains, while a ‘2’ means that all ion fragmentation   (AIF)    was   used for identification, and a ‘3’ means that only fragmentation associated   with the head group was available for identification.              

Legend

Lipid Molecule 

Identity of lipid molecule(s), see above for description of level of identification  

Polarity mode 

Positive or negative polarity of molecule identified     

m/z 

Mass-to-charge ratio of   molecule identified      

Retention Time (RT)

Retention time of molecule eluting from column     

Lipid Class 

Class of lipid(s)   identified       

Adduct_At_Max_Intensity 

Adduct observed for   species identified      

Peak area 

Total area under the curve for a given m/z value, for each individual biological replicate, and the pool of 3 bio-reps from the same condition