Out of chaos: Phylogenomics of Asian Sonerileae
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资源简介：
### Tigridiopalma_magnifica_reference_genome
Description: Reference genome sequence of Tigridiopalma magnifica
### Plastome_alignment.fasta
Description: Alignment of 223 whole chloroplast genomes
### genomic_dataset.vcf
Description: vcf file of the genomic dataset, generated by mapping whole-genome resequencing data of 223 samples to ***Tigridiopalma magnifica*** reference genome, further filtered based on hard filtering by GATK and LD by Plink.
### SCO_dataset.vcf
Description: vcf file of single-copy ortholog dataset, generated by mapping whole-genome resequencing data of 223 samples to 332 reference single copy orthologs, further filtered based on hard filtering by GATK.
### reference_sequeces_of_332_SCO.fasta
Description: 332 reference single-copy orthologs assembled using Mitobim, based on 332 single-copy genes identified by OrthoFinder.
创建时间：
2022-01-05
