Additional Files for "Assessing the potential of germplasm collections for the management of genetic diversity: the case of the French National Cryobank"

Additional files for the article entitled "Assessing the potential of germplasm collections for managing genetic diversity: the case of the French National Cryobank".

Additional file 1: Table S1

Title: Report on the output of material since the creation of the French National Cryobank

Additional file 2: Figure S1

Title: Summary of material outputs from the French National Cryobank since 1999

Additional file 3: Table S2

Title: Descriptors from the French National Cryobank data for six species

Additional file 4: Figure S2

Title: Distribution of data and definition of intervals regarding breed diffusion (A), donor birth-year classes (B), and classes of donor’s age at 1st collection (C)

Additional file 5: Table S3

Title: Statistics of the number of effective donors (De) according to species

Additional file 6: Table S4

Title: Distribution of donors and doses across breeds

Description: In green, the breeds for which the FNC collections meet FAO conditions for reconstitution of an extinct breed. In blue, the breeds for which the collections of the FNC do not yet meet FAO conditions for reconstitution of an extinct breed. In gray, FAO recommendations not available. Based on the 2012 FAO report, with 100 founder females for ruminants and horses, or 30 founder females for pigs (with a pregnancy rate of 0.6).

Additional file 7: Figure S3

Title: Evolution of genetic contributions of sires and their production of direct descendants in the French National Cryobank over the period 2011–2020 for three livestock species

Description: Two breeds of pigs are represented in pink (a, b), three breeds of sheep are represented in blue (c, d, e), and five breeds of cattle are represented in ochre (f, g, h, i, j).

Additional file 8: Figure S4

Title: Distribution of individual IDIs of cryopreserved sires for the 17 breeds analyzed

Description: Pig breeds are represented in pink, sheep breeds are represented in blue, and cattle breeds are represented in ochre.

Additional file 9: Figure S5

Title: Correlation between IDI values and the year of birth of donors

Additional file 10: Figure S6

Title: Prediction of IDI values based on donor’s year of birth and the motivation for entry into collection

Description: Type I (for endangered breeds) is represented in purple and type III (for representative individuals of a breed over a period) is represented in orange.