Caenorhabditis brenneri (C_brenneri-6.0.1b Nov. 2010)
收藏Genomic tRNA Database2026-04-18 收录
下载链接:
https://gtrnadb.ucsc.edu/genomes/eukaryota/Cbren3/
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资源简介:
High confidence set 874 tRNAs decoding standard 20 AA 871 Selenocysteine tRNAs (TCA) 3 Notable atypical predictions Anticodon/isotype mismatch 55 Unexpected anticodons 4 Non-canonical anticodon loop length 6 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 205 Secondary filter (low feature scores, possible rep. element) 114 Tertiary filter (excessive isotype copies, possible rep. element) 121 Leu CAA 14 Ile TAT 6 Tyr GTA 26 Isotype tRNA Count by Anticodon Total Ala AGC 34 GGC CGC 7 TGC 10 51 Gly ACC GCC 30 CCC TCC 30 Pro AGG 11 GGG CGG 8 TGG 52 71 Thr AGT 32 GGT CGT 9 TGT 14 55 Val AAC 33 GAC CAC 11 TAC 8 52 Isotype tRNA Count by Anticodon Total Ser AGA 20 GGA CGA 8 TGA 12 ACT GCT 11 51 Arg ACG 32 GCG CCG 15 TCG 17 CCT 6 TCT 12 82 Leu AAG 32 GAG CAG 8 TAG 8 CAA 14 TAA 6 68 Isotype tRNA Count by Anticodon Total Phe AAA GAA 23 23 Asn ATT GTT 32 32 Lys CTT 49 TTT 49 Asp ATC GTC 32 32 Glu CTC 37 TTC 33 70 His ATG GTG 24 24 Gln CTG 11 TTG 35 46 Isotype tRNA Count by Anticodon Total Ile AAT 33 GAT CAT TAT 6 39 iMet/Met CAT 12/16 28 Tyr ATA GTA 26 26 Supres TCA CTA TTA 0 Cys ACA GCA 20 20 Trp CCA 22 22 SelCys TCA 3 3
提供机构:
UCSC Genomic tRNA Database



