Genome-Wide Direct Target Identification Reveals the transcriptional regulatory Framework of WOX11 in Root Development in Rice

WUSCHEL-related homeobox domain trancription factor WOX11 is a key regulator of crown root growth and development in rice (Oryza sativa. L). However, the gene regulatory network downstream of WOX11 remains largely unknown. To dissect WOX11 transcriptional regulatory framework, we determined the transcriptome of wox11 mutants and corresponding wild type (Hwayoung) by using RNA-seq technology. Overall design: Genome-wide analysis of root tip transcriptome of wox11 mutant and corresponding wild type.