Data for: The Molecular Communications Markup Language (MolComML)

The XML files made available are those used to set up the molecular communications simulators to simulate the case studies described in the paper "The Molecular Communications Markup Language (MolComML". All details about the simulations are reported in the paper.

The first XML file, case_study_1_DiffusionBased.xml, is used to set up the simulation of a simple diffusion scenario (a punctiform transmitter and a spherical, absorbing receiver), and it is used by both BiNS2 and N3SIM simulators, producing the same results.

The second XML file, case_study_2_BloodCTC.xml, is used to set up the simulation of a section of a blood vessel to detect circulating cancer cells (CTCs) by a fixed transparent receiver, and it is used by the BiNS2 simulator.

The third XML file, case_study_3_combined_simulators_size_20.xml, is used to set up the simulation of the communication via diffusion of neurotransmitters in a synaptic cleft, from the axon terminal to the dendrite. The uploaded file is that generated as output by BiNS2 and used to configure the simulation in N3SIM.

所提供的XML文件是用于配置分子通信模拟器以模拟论文《分子通信标记语言（MolComML）》中描述的案例研究的文件。关于模拟的所有细节均在论文中有所报道。

第一个XML文件，case_study_1_DiffusionBased.xml，用于设置简单扩散场景（点状发射器和球形吸收接收器）的模拟，并由BiNS2和N3SIM模拟器使用，产生相同的结果。

第二个XML文件，case_study_2_BloodCTC.xml，用于设置模拟一段血管的模拟，以通过固定透明接收器检测循环癌细胞（CTCs），并由BiNS2模拟器使用。

第三个XML文件，case_study_3_combined_simulators_size_20.xml，用于设置神经突触间隙中神经递质通过扩散进行通信的模拟，从轴突末端到树突。上传的文件是BiNS2生成并用于配置N3SIM中模拟的输出文件。