De novo transcriptome generated from four half-sibling progeny of a mother tree (Mt. Rainier 'Shadow Lake 39') with putative resistance to white pine blister rust. Utilized as a reference for differen
Causal reasoning [11] uses a large curated database of directed regulatory molecular interactions to identify the most plausible upstream regulators of a gene set with a proposed directionality (eg. d
Panicum virgatum DAC6 Gene Expression Profiling. Leaf sample from F1 hybrid plant collected the day before chilling, grown in a chamber at 25C days and 20C nights
Additional file 5:Transcriptional connection matrix M. The transcriptional targeting of the 82 TFs to the 5169 genes is shown as a matrix M in which Mij = 1 if TF j targets gene i and Mij = 0 in the a