five

Jupyter Notebook Activity Dataset (rsds-20241113)

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NIAID Data Ecosystem2026-05-02 收录
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https://zenodo.org/record/13357569
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List of data rsds-20241113.zip: Collection of SQLite database files image.tar.gz: Docker image provided in our data collection experiment redspot-341ffa5.zip: Redspot source code (redspot@341ffa5) Extended version of Section 2D of our paper Redspot is a Jupyter extension (i.e., Python package) that records activity signals. However, it also offers interfaces to read recorded signals. The following shows the most basic usage of its command-line interface:   redspot replay This command generates snapshots (.ipynb files) restored from the signal records. Note that this command does not produce a snapshot for every signal. Since the change represented by a single signal is typically minimal (e.g., one keystroke), generating a snapshot for each signal results in a meaninglessly large number of snapshots. However, we want to obtain signal-level snapshots for some analyses. In such cases, one can analyze them using the application programming interfaces: from redspot import database from redspot.notebook import Notebook nbk = Notebook() for signal in database.get("path-to-db"):     time, panel, kind, args = signal     nbk.apply(kind, args) # apply change     print(nbk) # print notebook To record activities, one needs to run the Redspot command in the recording mode as follows: redspot record This command launches Jupyter Notebook with Redspot enabled. Activities made in the launched environment are stored in an SQLite file named ``redspot.db'' under the current path. To launch the environment we provided to the participants, one first needs to download and import the image (image.tar.gz). One can then run the image with the following command: docker run --rm -it -p8888:8888 Note that the SQLite file is generated in the running container. The file can be downloaded into the host machine via the file viewer of Jupyter Notebook.
创建时间:
2025-01-18
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