Cline fitting results

Provides information about all SNPs (one SNP per line) that passed filters and where either a model of clinal change provided the best fit (Type=Cline), or the allele frequency difference between cline ends was < 0.1 / the model of no clinal change provided the best fit (Type=NC).
- Contig: Reference genome contig the SNP is located on
- Position: Position of the SNP within the contig
- Type: Whether SNP showed clinal change (Cline) or no change (NC)
- Wave: Whether the reference allele is the more common allele in the Wave ecotype (1) or not (2)
- Centre: Position of the cline centre on the path along the shore (in m)
- Width: Width of the cline (in m)
- p_crab: Allele frequency in the Crab ecotype
- p_diff: Difference between Crab and Wave allele frequency
- Var.Ex: Variance explained by the cline model
- AIC_NC, AIC_cline, AIC_lt, AIC_rt, AIC_bt: AICs for different models (NC, Cline, left-tailed cline, right-tailed cline, two-tailed cline)
- sel: Whether a cline is inconsistent with neutrality, indicating direct or linked selection (i.e. whether Var.Ex is > then the threshold [35.69] defined by simulations)
- LG: Linkage group from genetic map on which SNP is located
- av: Position on the linkage group where SNP is located