Additional file 4: of QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles

QQ-SNV. The ZIP archive contains the following three files: the main perl script file to be executed QQ-SNV_workflow.pl and the SAS files QQ-SNV.sas and get_quantiles.sas. To test QQ-SNV, the read alignment files in SAM format for the HCV plasmid mixture data (downsampled 40Â %) and the HCV 1b reference file in FASTA format can be downloaded from http://sourceforge.net/projects/qqsnv. To run QQ-SNV execute the following command: perl QQ-SNV_workflow.pl. (ZIP 5 kb)