TripLexicon, a database of predicted gene regulatory RNA-DNA interactions

This repository contains all files, databases, plots and code used to generate the TripLexicon Webserver. Description of files: TripLexicon-main.zip : contains the github repository with the source code of TripLexicon as well as the documentation with readthedocs. Triplexicon_plots_15_09_25.zip: contains all plots used by the TripLexicon webserver databases_16_09_25.zip: contains the two databases (mouse and human) with the predicted triplexes by TriplexAligner which can be queried and visualized via TripLexicon. tables_17_05_25.zip: tables with the data contained in the two TripLexicon databases (mouse and human) bed_files_DNA_regions_16_09_25.zip: BED files containing all DNA target regions involved in triplex formation as given in TripLexicon beds_TripLexicon_17_09_25.zip: BED files of DNA regions bound per RNA, used for visualization in the UCSC genome browser