raisd-ai_evaluation_dataset_high_intensity_recombination_hotspot_merge_2K

Dataset of high intensity recombination hotspot (1000 simulations) merged with a mild bottleneck (1000 simulations) used for the evaluation of RAiSD-AI software.The commands to generate recombination hotspot MS files are:train/neutral.ms: ./msHOT/msHOT 128 1000 -t 2000 -r 2000 2000 -eN .10000000000000000000 0.5 -eN .10040000000000000000 1 -v 1 950 1050 2024911 5763 23421train/selsweep.ms: command: ./../mbs/mbs 128 -t 0.02 -r 0.02 -s 100000 1000 -f 1 1000 ./../mbsFiles/traj -h ./../mbsFiles/rechot_47500_52500_20.txttest/neutral.ms: ./msHOT/msHOT 128 1000 -t 2000 -r 2000 2000 -eN .10000000000000000000 0.5 -eN .10040000000000000000 1 -v 1 950 1050 2047112 3587 13815test/selsweep.ms: command: ./mbs/mbs 128 -t 0.02 -r 0.02 -s 100000 50000 -f 1 1000 ./mbsFiles/traj -h ./mbsFiles/rechot_47500_52500_20.txtThe commands to generate mild bottleneck MS files are:train/neutral.ms: ./msdir/ms 128 1000 -t 2000 -r 2000 2000 -eN .10000000000000000000 0.5 -eN .10040000000000000000 1 7316 60926 22395train/selsweep.ms: ./msseldir/mssel 128 1000 0 128 ./trajectory_files/trajectory1.txt 1000 -t 2000 -r 2000 2000 -eN .10000000000000000000 0.5 -eN .10040000000000000000 1 7316 60926 22395test/neutral.ms: ./msdir/ms 128 1000 -t 2000 -r 2000 2000 -eN .10000000000000000000 0.5 -eN .10040000000000000000 1 3380 19597 12002test/selsweep.ms: ./msseldir/mssel 128 1000 0 128 ./trajectory_files/trajectory1.txt 1000 -t 2000 -r 2000 2000 -eN .10000000000000000000 0.5 -eN .10040000000000000000 1 3380 19597 12002