Simulation POPC_512_TM3_D2A_10_5up_5down_NaCl_150mM_310K_rep3 membrane

<strong>Title publication: </strong><em>A Ceramide-Regulated Element in the Late Endosomal Protein LAPTM4B Controls Amino Acid Transporter Interaction</em> <strong><strong>Year publication:</strong></strong><strong> </strong>2018 <strong>DOI publication: </strong>10.1021/acscentsci.7b00582 <strong>Description:</strong> Simulation POPC membrane containing ten LAPTM4B-TM3 with D2A mutation in the water phase using charmm36 at 310K. <strong>MD engine:</strong> gromacs 2016.1 <strong>Force field</strong>: charmm36 <strong>Temperature</strong>: 310 K <strong>Pressure:</strong> 1 bar <strong>Simulation time</strong>: 2000 ns <strong>Saving frequency</strong>: 100 ps <strong>Molecular content</strong>: TM3_D2A 10<br> POPC 512<br> SOL 29366<br> NA 79<br> CL 79 <strong>Additional </strong><strong>information</strong>:<br> * Membrane containing LAPTM3_D2A peptides (Ac-AWIIPFFCYQIFDFALNMLVAITVLIY-NH2). D to A muation.