TE polymorphisms detection and analysis

This dataset contains i) output files from "Kozlowski D. 2020a. Transposable Elements prediction and annotation in the M. incognita genome. Portail Data INRAE [Internet]. Available from: https://doi.org/10.15454/EPTDOS", "Kozlowski D. 2020b. Transposable Elements prediction and annotation in the C. elegans genome. Portail Data INRAE [Internet]. Available from: https://doi.org/10.15454/LQCIW0", and "These analyses are presented in detail in Kozlowski D, Da Rocha M, Danchin E. 2020. TE-related genes: annotation, characterisation, and expression. Portail Data INRAE [Internet]. Available from: https://doi.org/10.15454/DLDJVF" ; ii) popoolationTE2 workflow used to detect polymorphism across M. incognita's isolates and evaluate the tool error rate; iii) the global analysis workflow and associated results; and iv) the produced figures. Download: In order to preserve the folder and file tree structure (easier to reproduce the analyses), select all the files and click on download (original format). The download of a .zip archive should start. Once downloaded, extract the contents of the archive.