Additional file 1 of Selection on the promoter regions plays an important role in complex traits during duck domestication

Additional file 1. Table S1. Summary of multi-omics sequencing data during duck domestication. Table S2. Variation annotation detected in mallard and Pekin duck populations. Table S3. Genes that are located in the top 5% of selected regions. Table S4. The effect and number of variations in the gene body of selected genes in the mallard and Pekin duck population. Table S5. Selection and regulation characteristics of upstream selected genes. Table S6. Summary of ATAC-Seq data mapped to the mallard reference genome. Table S7. Summary of Hi-C data mapped to the mallard reference genome. Table S8. Genes located near the differential TAD boundaries between mallard and Pekin duck. Table S9. Different expression signatures of genes with selected promoters with potential regulatory regions in upstream of breast muscle, liver, and fat tissues. Table S10. The traits affected by genes with selected promoters with functions related to selected traits in other studies. Table S11. Quantitative Results of Medium and Long Chain Fatty Acids by Gas Mass Spectrometry. Table S12. Specific differentially expressed genes during adipocyte differentiation induced by overexpression of ELOVL3 compared with wild type. Table S13. Sequence information relating to primers designed in this study. Table S14. Standard curve of Medium and Long Chain Fatty Acids by Gas Mass Spectrometry.