Amt/MEP/Rh Superfamily and Rhesus-like protein phylogeny
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https://figshare.com/articles/dataset/Amt_MEP_Rh_Superfamily_and_Rhesus-like_protein_phylogeny/9722807
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Phylogenetics of Amt/MEP/Rh Superfamily.
As described in the methods, the taxon selection is the same as that from Monier et al. 2018, supplemented with proteins from 19 choanoflagellates (Richter et al. 2018). The total number of amino acid positions analyzed was 373.
Raw Alignment: mafft.all.ammonium.fa
Filtered Alignment: trim.seqoverlap60.gt0.5.mafft.all.ammonium.fa
Newick tree: fasttree.seqoverlap60.gt0.5.mafft.all.ammonium.fa
Rh protein family, which includes mostly animal proteins, and diverse protists. The phylogeny includes 1,531 sequences and 363 positions.
Raw Alignment: mafft.rhesus.fa
Filtered Alignment: trim.seqoverlap60.gt0.5.mafft.rhesus.fa
Newick tree: fasttree.seqoverlap60.gt0.5.mafft.rhesus.list.fa
创建时间：
2019-08-23
