five

FASTA assembly file and annotation file of Hylyphantes graminicola

收藏
Mendeley Data2024-01-31 更新2024-06-28 收录
下载链接:
https://www.scidb.cn/en/detail?dataSetId=b2a377bee8184231bbf8bee49bd98928
下载链接
链接失效反馈
官方服务:
资源简介:
FASTA assembly file and annotation file of Hylyphantes graminicola were saved in this dataset. A ".gz" file of genome assembly and a GFF file of annotation were included. Long-reads (PacBio), short-reads (Illumina), and Hi-C technology were used to produce the near chromosome-level genome of the sheet-web spider, Hylyphantes graminicola (Linyphiidae). We mainly used software Nextdenovo v2.2 and NextPolish v1.1 to assemble the genome. We applied three strategies for gene structure prediction across the genome: homology-based annotation, de novo prediction, and RNAseq-based annotation. Obtaining high-quality chromosome-level genomes from spiders not only facilitates venom research and toxin resource application, but also can improve comparative genomic analysis in other important traits, like the evolution of silk or behavior.
创建时间:
2024-01-31
二维码
社区交流群
二维码
科研交流群
商业服务