首页/数据集/Transcriptional changes in Escherichia coli during a shift from fermentation to Trimethylamine-N-oxide (TMAO) respiration

Transcriptional changes in Escherichia coli during a shift from fermentation to Trimethylamine-N-oxide (TMAO) respiration

ChEBI2014-12-13 更新2026-07-21 收录

微生物代谢

转录组响应

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-MTAB-2784 数据链接链接失效反馈

官方服务：

资源简介：

Transcriptional changes in Escherichia coli during a shift from fermentation to Trimethylamine-N-oxide (TMAO) respiration

应用场景：

创建时间：

2014-12-13

微生物代谢

中心碳代谢

Temperature is a primary driver of microbial community composition and taxonomic diversity; however, it is unclear to what extent temperature affects characteristics of central carbon metabolic pathwa

NIAID Data Ecosystem70

Analysis of Escherichia coli Anaplerotic Metabolism and Its Regulation Mechanisms From the Metabolic Responses to Altered Dilution Rates and Phosphoenolpyruvate Carboxykinase Knockout [Datasets]

微生物代谢

基因调控

Data from the manuscript: Yang C, Hua Q, Baba T, Mori H, Shimizu K. Analysis of Escherichia coli anaplerotic metabolism and its regulation mechanisms from the metabolic responses to altered dilution r

DataCite Commons2020-07-31 更新60

Constrained Allocation Flux Balance Analysis

代谢通量分析

微生物代谢

New experimental results on bacterial growth inspire a novel top-down approach to study cell metabolism, combining mass balance and proteomic constraints to extend and complement Flux Balance Analysis

NIAID Data Ecosystem50

LC-MS/MS of autotrophic culture BP, that performs nitrate reduction coupled to iron(II) oxidation (NDFO)

微生物代谢

环境微生物

Nitrate-reducing iron(II)-oxidizing (NDFO) bacteria are widespread in the environment contribute to nitrate removal and influence the fate of the greenhouse gases nitrous oxide and carbon dioxide. The

NIAID Data Ecosystem70

Effect of exogenous indole on Edwardsiella tarda 15947 metabolomic data

代谢组学

微生物代谢

Effect of exogenous indole on Edwardsiella tarda 15947 LC-MS metabolomic data.

Figshare2025-09-19 更新60