Datasets for Cornet et al. The taxonomy of the Trichophyton rubrum complex: a phylogenomic approach
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https://figshare.com/articles/dataset/Datasets_for_Cornet_et_al_The_taxonomy_of_the_Trichophyton_rubrum_complex_a_phylogenomic_approach/14762394/2
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资源简介：
├── Alignments│ ├── leel-3105-genes # DNA alignments of core genes│ └── orthofinder-3105-genes # Protein alignments of core genes├── AMAW-annotations │ ├── *-proteins.fasta # AMAW annotations├── Markers │ ├── OG0000291.fna # MYB DNA-binding domain-containing protein marker file │ └── OG0004200.fna # Ubiquitin-protein transferase marker file├── README├── SCaFoS│ ├── DNA # DNA concatenated dataset and informations│ └── PROT # Protein concatenated dataset and informations└── Unpublished-Large_DNA-phylogenies ├── DNA-large-BMGE_DNA-Codon1and2and3.tre # DNA large phylogeny: leel alignement, BMGE with codon option, no partition, GTRGAMMA ├── DNA-large-leel-Codon1and2and3.tre # DNA large phylogeny: leel alignment, no partition, GTRGAMMA ├── DNA-large-leel-Codon1and2.tre # DNA large phylogeny: leel alignment, only codon positions 1&2, no partition, GTRGAMMA └── DNA-large-leel-partitionCodon3.tre # DNA large phylogeny: leel alignment, partition on codon position 3, GTRGAMMA<br>
提供机构：
Becker, Pierre; Stubbe, Dirk; Packeu, Ann; Cornet, Luc; D'hooge, Elizabet; Magain, Nicolas; BAURAIN, Denis
创建时间：
2021-10-02
