SPTT & SPTEdu-seq dataset

Dataset OverviewThis dataset has been generated using our SPTT and SPTEdu-seq techniques. Below are the details for each file included:FilesTo optimize storage, all datasets are compressed into tar.gz format. Please extract the files after downloading.MOB.tar.gzProfiled by: SPTTContents:Digital expression data (in sparse matrix .mtx format)Metadata including:Spatial barcodesSpatial coordinatesSeurat clusters(and cell type annotations)Other essential informationMouseBrain.tar.gzProfiled by: SPTTContents:Digital expression data (in sparse matrix .mtx format)Metadata including:Spatial barcodesSpatial coordinatesSeurat clusters(and cell type annotations)Other essential informationIS_MOB.tar.gzProfiled by: SPTEdu-seqContents:Digital expression data (in sparse matrix .mtx format)Metadata including:Spatial barcodesSpatial coordinatesSeurat clustersDesignations of barcodes as either hippocampus region or cortex region for cell type deconvolution and RNA velocity assaysIS_uninjured.tar.gz, IS_3dpi.tar.gz, IS_7dpi.tar.gz, and IS_14dpi.tar.gzProfiled by: SPTEdu-seqContents:Digital expression data (in sparse matrix .mtx format)Metadata including:Spatial barcodesSpatial coordinatesUTI profiling numbersSeurat clustersDesignations of barcodes as injury regions (based on unsupervised clustering and spatial coordinates)