Additional file 6: of OGS2: genome re-annotation of the jewel wasp Nasonia vitripennis
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https://figshare.com/articles/dataset/Additional_file_6_of_OGS2_genome_re-annotation_of_the_jewel_wasp_Nasonia_vitripennis/4438367
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Table of OGS2 gene transcripts equivalences to OGS1 and NCBI-101 gene sets, using the CDS-exon locations on the genome assembly. “NCBI101geneID” and “OGS1geneID” include equivalence value as percent equal to CDS.EXON. For example: Nasvi2EG000002t1 nasvn14g1803t1/99.70 is 99 % CDS equal, 70 % exon equal; NV10001-RA/74.89 is 74 % CDS equal, 89 % exon equal. The “NCBI101geneID” is the local ID “gene1803” from the NCBI GFF gene table, adding “nasvn14g” prefix and alternate transcript suffix “t1,t2,..”, with associated column of public “NCBI101transcriptID” (XM_ or NM_). “Genome21loc” is the gene span location on Nvit_2.1 scaffold assembly, “Genome1loc” is the gene span location on Nvit_1.0 scaffold assembly (most Nvit_2.1 and 1.0 are equivalent). “NCBI101also” and “OGS1also” are additional gene transcripts with partial equivalence to the OGS2 gene. Nonequivalence values: “na” for “NCBI101geneID”, “novid” for “OGS1geneID”. “WaspAtlasNCBI101” lists NCBI-101 equivalent genes provided by [40]. Disagreements are marked by “*”. These appear to be UTR-exon or gene-span overlaps, rather than the CDS-exon overlap used in this table equivalence. (XLSX 2889 kb)
创建时间:
2016-12-15



