Data from: Opsins have evolved under the permanent heterozygote model: insights from phylotranscriptomics of Odonata
收藏Mendeley Data2024-06-25 更新2024-06-27 收录
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https://datadryad.org/stash/dataset/doi:10.5061/dryad.pb5vv
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资源简介：
Opsin Alignment1Multiple sequence COBALT alignment putative Odonata and Ephemeroptera opsin protein sequences including homologous opsin sequences from mollusks (outgroup).Alignment1.fastaOpsin Alignment2Multiple sequence COBALT alignment of putative Odonata and Ephemeroptera opsin protein sequences including homologous opsin sequences from mollusks (outgroup). All partial opsin sequences (< 1056 bp and < 7 transmembrane domains) were excluded.Alignment2.fastaOpsin Alignment3Multiple sequence COBALT alignment of putative Odonata and Ephemeroptera opsin protein sequences including homologous opsin sequences from mollusks (outgroup) combined with opsins identified in (Futahashi et al. 2015).Alignment3.fastaBayesian "diffusion" modelNaive Bayesian model of selection "diffusion" written in R programming language.Bayesian_diffusion_model.rTranscriptome Trinity assembliesTranscriptome Trinity assemblies. NCBI accession numbers of raw RNA-seq libraries that were used to assemble transcriptomes: SRR2164542 SRR2164543 SRR2164551 SRR2164552 SRR2157378 SRR2157379 SRR2157380 SRR2157381 SRR2157382 SRR2157383 SRR2164544 SRR2164545 SRR2157367 SRR2164546 SRR2164547 SRR2164548 SRR2157371 SRR2157372 SRR2164549 SRR2164550transcriptomes.tgz
创建时间：
2023-06-28
