Transcriptome - Pirum gemmata
收藏Figshare2017-09-27 更新2026-04-08 收录
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https://figshare.com/articles/dataset/Pirum_gemmata_s_Transcriptome/3900036
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资源简介：
- clean.fasta: Assembly cleaned from cross-contamination of other species multiplexed (Corallochytrium limacisporum Hawaii, Abeoforma whisleri and Parvularia atlantis [Nuclearia sp ATCC 50694]) after applying CroCo V0.1.1 (Simion et al. in prep).<br><br>- Assembly in-home BGI to obtain Unigene (contigs)- ORF prediction using TransDecoder (Trinity plugin) and PfamScan to obtain coding sequences (CDS files) from transcripts (mRNA)- Protein translations are included (pep)<br><strong>Guifré Torruella, Alex de Mendoza, Xavier Grau-Bové, Meritxell Antó, </strong>Mark A. Chaplin<strong>, Javier del Campo, </strong>Laura Eme, Gregorio Pérez-Cordón, Christopher M. Whipps, Krista M. Nichols, Richard Paley, Andrew J. Roger, Ariadna Sitjà-Bobadilla, Stuart Donachie,<strong> and Iñaki Ruiz-Trillo. </strong>(2015) <em>Phylogenomics reveals convergent evolution of lifestyles in close relatives of animals and fungi.</em> <strong><em>Current Biology </em></strong>25(18):2404-10.<br>www.multicellgenome.com
提供机构：
Multicellgenome Lab
创建时间：
2016-09-28
