TMT MS3 data from the msdata package

MS3TMT10_01022016_32917-33481.mzML.gz A subset of 565 spectra from a currenly unpublished TMT 10-plex experiment run on an Thermo Orbitrap Lumos with synchronous precursor selection (SPS) MS3. Only the MS2 spectra were centroided during convertion using `msconvert` (ProteoWizard release: 3.0.9283 (2016-1-11)) using vendor libraries. MS3TMT11.mzML: A subset of 994 spectra from a currenly unpublished MS3 SPS TMT 11-plex experiment converted to mzML using `msconvert`. The file contains 30, 482 and 482 MS1, MS2 and MS3 spectra, respectively. The MS1 spectra are in profile mode; other MS levels are centroided. See 'Sensitive and Accurate Quantitation of Phosphopeptides Using TMT Isobaric Labeling Technique' for details about the acquisition method. A feature data containing identification data is available with `fdms3tmt11`, which can be used to directly update the feature data.