Processed data files for conplastic mice mitochondrial DNA profiling

This dataset contains all tables used and generated in analyses for the conplastic mice mitochondrial DNA profiling project. Please refer to serrano2023_directory_of_files.pdf for a description of the files. The serrano2023_directory_of_files.pdf also contains field descriptions for: somatic_mutations.vcf haplotype_mutations.vcf supertable.txt cleaned_read_depth_per_pos.txt adjusted_mut_freq_for_haplotypes.csv mut_freq_per_type.csv All scripts that generate the files in this zenodo repo can be found at https://github.com/sudmantlab/conplastic_mt_profiling Single stranded and duplex consensus fastq files can be found at the following zenodo repositories: (Wildtype) B6 fastq files B6-mtAKR fastq files B6-mtALR fastq files B6-mtFVB fastq files B6-mtNZB fastq files