Comparison of the gene annotation by Prodigual, GeneMarkS, and Glimmer3 with the annotated sequences of the reference strain PAO1.

The values indicate the numbers of predicted genes falling into each category. The percentages indicate the proportion of the 5,542 annotated genes of PAO1 correctly annotated (100% identical).aPredicted gene is 100% identical with a reference gene.bPredicted gene is ≥ 50% identical with a reference gene.cPredicted gene is Comparison of the gene annotation by Prodigual, GeneMarkS, and Glimmer3 with the annotated sequences of the reference strain PAO1.