Supporting data and code for "DNA transposon expansion drives genome plasticity in Diutina catenulata"

Description Data and code associated with the manuscript “DNA transposon expansion drives genome plasticity in Diutina catenulata”. Article citation: Bigey, F., Wessner, M., Pradal, M., Cruaud, C., Aury, J.-M. & Neuveglise, C. (2026)DNA transposon expansion drives genome plasticity in Diutina catenulata.Nature Communications. doi: 10.1038/s41467-026-74608-6, PMID: 42399237 This repository provides reproducible pipelines for genome assembly and annotation, comparative genomics, phylogenetic inference, and the identification and characterization of Dici transposons. It is intended to support the analyses presented in the manuscript and facilitate reuse by the community. See README.md for a complete description of the files. Versions v1.2: update with Nature Communications article citation, 2026-07-05, v1.1: corrected release on 2026-05-22, v1.0: this release contains scripts used to detect *Dici* transposition events in experimental evolution datasets, 2026-04-16, v1.0-pre: initial release candidate, 2025-11-14