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Comparison of coastal phytoplankton composition estimated from the V4 and V9 regions of 18S rRNA gene with a focus on Chlorophyta

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Figshare2017-09-01 更新2026-04-29 收录
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https://figshare.com/articles/dataset/Comparison_of_coastal_phytoplankton_composition_estimated_from_the_V4_and_V9_regions_of_18S_rRNA_gene_with_a_focus_on_Chlorophyta/4252646
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Supplementary data 1. Mothur script for sequence analysisSupp. data 2. Fasta file of Chlorophyta OTUs for V4Supp. data 3. Fasta file of Chlorophyta OTUs for V9Supp. data 4. Chlorophyta OTUs for V4 with assignation and read abundance at the different stations (Excel file).Supp. data 5. Chlorophyta OTUs for V9 with assignation and read abundance at the different stations (Excel file).Supp. data 6. Top 10 BLAST hits against Genbank nr database for Chlorophyta V4 OTUs. Red lines correspond to OTUs badly assigned to non Chlorophyta and green corresponds to OTUs badly assigned to another Chlorophyta representative.Supp. data 7. Top 10 BLAST hits against Genbank nr database for Chlorophyta V9 OTUs. Red lines correspond to OTUs badly assigned to non Chlorophyta and green lines corresponds to OTUs badly assigned to another Chlorophyta representative.
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2017-09-01
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