Data underlying the publication "Genetic Mapping of the Root Mycobiota in rice and its Role in Drought Tolerance"
收藏4TU.ResearchData2023-05-24 更新2026-04-23 收录
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https://data.4tu.nl/datasets/9526a9b6-0690-4829-aed5-e4b88734e6c1/1
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资源简介:
Microbial and genomic data from root samples from rice plants grown under flooded and drought conditions, to unravel the genetic factors involved in the rice-microbe interaction, and whether genetics play a role in rice drought tolerance. Root mycobiota was characterized (18S SSU rRNA) in 296 rice accessions (Oryza sativa L. subsp. indica) under control and drought conditions. Genome wide association mapping (GWAS) resulted in the identification of ten significant single nucleotide polymorphisms (SNPs) associated with root-associated fungi.
本数据集涵盖淹水与干旱处理条件下水稻植株根样本的微生物与基因组数据,旨在阐明水稻-微生物互作相关的遗传调控因子,并探究遗传因素是否在水稻耐旱性中发挥作用。研究针对296份籼稻(Oryza sativa L. subsp. indica)种质资源,在对照与干旱处理条件下,通过18S小亚基核糖体RNA(18S SSU rRNA)分析对其根系真菌群落进行了表征。借助全基因组关联分析(GWAS),最终鉴定得到10个与根系共生真菌显著关联的单核苷酸多态性(SNPs)。
提供机构:
Kadam, Niteen; Kruijer, Willem; te Beest, Dennis; Vannier, Nathan
创建时间:
2023-05-24



