RNA-seq of Yersinia pseudotuberculosis IP32953 under different culture conditions and during infection in mice. IP32953 RNA-seq

Here we performed strand-specific RNA-seq of Y. pseudotuberculosis IP32953 grown under 4 different laboratory conditions (LB broth, exponential/stationary phase, 25C/37C), in biological triplicates. The first replicate is also available as a non TAP version to allow for bacterial transcriptional start site mapping. In addition, we performed RNA-seq of IP32953 within murine Peyers patches (female BALB/c mice) and Peyers patches of uninfected mice, in biological triplicates. ERCC ExFold RNA Spike-In Mixes were added to mouse rRNA depleted RNA from Peyers patches.