five

raw SNP file

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Mendeley Data2024-01-31 更新2024-06-29 收录
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http://datadryad.org/resource/doi:10.5061/dryad.n276d/1
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This is the raw SNP file used for all analyses. It was produced using GATK and pre-filtered using vcftools (i.e. minimal genotyping rate of 0.45 and a maximal normalized coverage of 2). This includes SNPs which are not within 90bp of cut sites (hence SNPs located on R2 reads are included here). For analyses presented in the manuscript, further filters were applied. See methods part in the manuscript.
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2024-01-31
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