Additional file 1 of In silico prediction of potential indigenous microbial biomarkers in Penaeus vannamei identified through meta-analysis and genome-scale metabolic modelling
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Additional file 1. Table S1. Initial Dataset collected for the study. Table S2. Final Dataset considered for the analysis. Table S3. List of healthy and disease assigned species obtained from BLASTP analysis and subjected to FBA. Table S4. Minimal media components used for building Genome scale metabolic models. Table S5. List of carbon sources used for simulation of models. Table S6. Alpha and Beta diversity indices for Individual datasets. Table S7. Alpha and Beta diversity indices for combined datasets. Table S8. List of Healthy and Disease biomarkers identified with LEfSe. Table S9a. List of Healthy Co-occurring genera identified with HiOrco. Table S9b. Co-ocurring genera identified with HiOrco in disease state. Table S10. List of short-listed communities with growth advantage of healthy species in at least five nutrient environments
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2024-08-13



