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Additional file 25 of Loss of EZH2-like or SU(VAR)3–9-like proteins causes simultaneous perturbations in H3K27 and H3K9 tri-methylation and associated developmental defects in the fungus Podospora anserina

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Additional file 25: Table S7. Heatmap of Spearman correlation coefficient comparison between ChIP-seq samples. Samples are labeled as follow: Genotype_strain_marks. E.g., KMT6-11d_K9 = ΔPaKmt6 strain, from spore number 11d (biological replicate), IP = H3K9me3. Spearman’s correlation coefficient confirms the reproducibility of the experiments since biological replicates cluster together with high correlation coefficients. Moreover, H3K9me3 and H3K27me3 IP share a same cluster that negatively correlates with the H3K4me3 cluster. Both display no correlation with non-IP input and negative sample (Mock and H3K27me3 in the ΔPaKmt6), which means that IP results are significant and specific.

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2021-05-08
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