Archives

Each directory contains Training, Validation and Test datasets in fasta format. Directory names contain the following information about the MSAs: <br>1) Gap (w/ indels) or nogap (w/o indels) MSAs2) Number of MSAs per topology generated for training (i.e. 50k MSA * 3 possible topologies = 150k MSAs in TRAIN.fasta file) Order of topologies: 50k x ((D,A),B,C); 50k x ((D,B),A,C); 50k x ((D,C),A,B);3) MSA length (500, 1000 or 10000)<br>List of all directories:archive1_gap.tar.gz gap50k_1000 gap50k_10000 gap50k_500archive2_nogap.tar.gz nogap150k_1000 nogap300k_1000 nogap50k_1000 nogap50k_10000 nogap50k_500