Additional file 3 of Smarcad1 mediates microbiota-induced inflammation in mouse and coordinates gene expression in the intestinal epithelium

Additional file 3: Table S2. Differentially expressed genes on Smarcad1-KO in ISC, TA, AE and small intestine derived organoids. Gene lists and their overlaps as shown in Additional file 1: Fig. S2a. Table contents: Gene name, chromosomal position, DESeq2 FDR, gene ID, gene description, average expression levels (n = 3, log2 normalized to total reads) in the corresponding RNA-seq dataset. Separate tab comparing the 4 lists (ISC, TA, AE, organoids). Separate tabs listing all genes expressed in small intestinal organoids and colon crypts (sorted cell and whole crypt datasets combined).